Ruan Yang

Sentiment_Analysis_cnn_lstm_cnnlstm_textcnn_bilstm. 利用CNN,LSTM,CNN_LSTM,TextCNN,Bi-LSTM和传统的机器学习算法进行情感分析，参考：https://github.com/Edward1Chou/SentimentAnalysis

gromacs-free-energy-calculation. This repository contained python code used to do organic free energy calculation. Reference: http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin/gmx-tutorials/free_energy/index.html; https://github.com/ruanyangry/gromacs-lammps-process-simulation.

gromacs-lammps-process-simulation. This repository contained python code used to do gromacs and lammps molecular dynamics simulation. Process to generate topology files compatible with AMBER force field (GAFF). Automatically generate simulation control files for gromacs and lammps.

Machine-Learning-in-Materials-Characterization. This repository contained python code used to analysis Material microstructure and spectral data. Reference https://github.com/pycroscopy.

Lammps-analysis-code. This repository contained Fortran and python code used to analysis lammps output file.

gromacs-ion-water-simulation. This repository contained python code used to do ion water system simulation.

Deep-Learning-materials. This repository contained Stanford, Oxford and Hung-yi Lee Deep Learning course materials.

Sentence_Similarity. 句子相似性计算，使用TF-IDF,LSI,LDA

Keras_NLP_Study. 基于keras/examples中的NLP案例进行改写和测试

lectures. Oxford Deep NLP 2017 course

pycroscopy. Scientific analysis of nanoscale materials imaging data

handson-ml. A series of Jupyter notebooks that walk you through the fundamentals of Machine Learning and Deep Learning in python using Scikit-Learn and TensorFlow.

lammps_interface. automatic generation of LAMMPS input files for molecular dynamics simulations of MOFs

pycse. Python computations in science and engineering

Machine-Learning-in-Materials. This repository contained python code to do supervise learning and unsupervise learning in materials field.

Machine-Learning-in-Action-Book-scripts.

lammps-data. Using single molecule data file build bulk system data file. Inspired by gromcas .itp file and .top. If you are good at using gromcs and you want to use the lammps software for a special function simulation.This code can conveniently obtain the configuration file of the bulk phase topology.

forcebalance. Systematic force field optimization.

mdanalysis. MDAnalysis is a Python library to analyze molecular dynamics trajectories.

fastText-Study. 学习fastText进行文本分类