Panwen Wang

python-varname. Dark magics about variable names in python

scplotter. scplotter is an R package that is built upon plotthis. It provides a set of functions to visualize single-cell sequencing and spatial data in an easy and efficient way.

datar. A Grammar of Data Manipulation in python

vscode-gptcommit. Automated git commit messages using GPT models via gptcommit for VS Code.

cnn-convoluter. An interactive player for CNN convolution

pipen. A pipeline framework for python

plotthis. plotthis is an R package that is built upon ggplot2 and other plotting packages.

vcfstats. Powerful statistics for VCF files

liquidpy. A port of liquid template engine for python

toml-bench. Which toml package to use in python?

pipda. A framework for data piping in python

immunopipe. Integrative analysis for scRNA-seq and scTCR-/scBCR-seq data

plotnine-prism. Prism themes for plotnine, inspired by ggprism.

python-import-system. Python import system diagram

pymedoo. A lightweight database framework for python

biopipen. A set of processes/pipelines for bioinformatics

diot. Python dictionary with dot notation

Bioinformatics-cheatsheet. A cheat sheet for Bioinformatians.

xqute. A job management system for python

simplug. A simple plugin system for python with async hooks supported

pyparam. Powerful parameter processing for python

enrichr. A python wrapper for Enrichr APIs

python-simpleconf. Simple configuration management with python

pdtypes. Show data types for pandas data frames in terminal and notebooks

argx. Supercharged argparse for Python

datar-numpy. The numpy backend for datar.

completions. Shell completions for your program made easy.

enrichit. An R package for enrichment (over-representation) analysis of gene sets.

dotdict-bench. Benchmarking for dot-accessible dict packages in python

attr_property. Property support for attrs

datar-pandas. The pandas backend for datar

cmdQueue. A job queue available on Windows and *nix

pipen-diagram. Draw pipeline diagrams for pipen.

pardoc. Yet another docstring parser for python

plkit. A wrapper of pytorch-lightning that makes you write even less code.

fish-autoenv. Autoenv for fish

jquery.msgbox. A jquery popup plugin

pipen-args. Command line argument parser for pipen

pipen-verbose. Add verbosal information in logs for pipen.

pipen-report. Report generation system for pipen

regexr. Regular expressions for humans

gglogger. gglogger is an R package that logs the calls used to create ggplot2 objects.

neutrapy. A CLI tool to build desktop applications with Neutralinojs and Python as backend

cmdy. "Shell language" to run command in python

immunopipe-example. An example of immunopipe

pipen-cli-require. Checking the requirements for processes of a pipeline

datar-arrow. Python

pipen-filters. Add a set of useful filters for pipen templates.

pipen-log2file. Save running logs to file for pipen

immunopipe-AdrienneML-2020. Reanalysis of the scRNA-seq and scTCR-seq data from Luoma, Adrienne M., et al. 2020 using immunopipe.

pipen-annotate. Use docstring to annotate pipen processes

pipen-dry. Dry runner for pipen

lichee. Multi-sample cancer phylogeny reconstruction

benchwork. A framework for benchmarking in python

CCPlotR. An R package for visualising cell-cell interactions

datar-blog. A blog about datar

pipen-runinfo. Generate running information for jobs in pipen pipelines.

pyppl_annotate. Adding long description/annotations for PyPPL processes.

pyppl_lock. Preventing running processes from running again for PyPPL