Philipp Baumann

simplerspec. Streamlining data processing and modeling for spectroscopy applications

yamsys-soilspec-publication. Data, R scripts, results (figures, tables, R model outputs) and manuscript for the YAMSYS (see http://yamsys.org) mid-infrared spectroscopy calibration models.

spc-proc-concepts. Outline spectral processing concepts :cyclone:

simplerspec-pedometron-article. Repository for the simplerspec Pedometron article: http://www.pedometrics.org/Pedometron/Pedometron45.pdf

simplerspec.opus. Automated IR spectrometer data workflow routines for spectra measured via Bruker OPUS Lab interface

swiss-mid-ir-ssl_spectra_version1. Raw and processed spectra of the Swiss mid-infrared soil spectral library in version 1 📦

simplerspec-teaching. Teaching material for infrared spectroscopy applications :raising_hand:

ir. Provides a tidy data structure for infrared spectra and functions to handle and preprocess them.

rextendr. R

ggtrace. ggplot2 geoms to outline groups of data points

precommit-r-nix. pre-commit hooks for R projects: Nix'ified fork for {rix}

libR-sys. Low level R bindgen interface

snsf-open-access-check. Code of SNSF Open Access Check. The application SNSF Open Access Check was developed by the SNSF with R Shiny as a prototype. Using data from Dimensions and Unpaywall, this prototype is limited for the time being to researchers based in Switzerland.

rocky-tools. Shell

hex-stickers. RStudio hex stickers

qgis-slim. Headless QGIS as a container

extrachecks. Extra R package checks to save you from a headache. A package to accompany https://github.com/DavisVaughan/extrachecks

rix-flakes. Nix

swissspec. Routines used for the development of the Swiss mid-IR soil spectral library (CH-SSL) in version 1.0

QField-docs. Documentation for the QField ecosystem

swissopengov_social-change. Facilitating social change in CH using OpenGovernmentData

simplerspec-read-filter-transform. Tutorial about reading, filter and transform spectra and metadata

git-tips-and-tricks. Personal record of daily tips and tricks for smooth git version control

afsis-soil-chem-tutorial. Description and usage tutorial for the AWS Public Dataset produced by AfSIS (arn:aws:s3:::afsis)

qfieldcloud. QFieldCloud allows seamless synchronization of your field data with your spatial infrastructure with change tracking, team management and online-offline work capabilities in QField.

cloudFTIR. Simple app for exploring FTIR Spectrum

prospectr. R package: Misc. Functions for Processing and Sample Selection of Spectroscopic Data

watchdog. Python library and shell utilities to monitor filesystem events.

goodpractice. Advice on R Package Building

copc-rs-test. Testing copc-rs

phd. My dissertation: Scaling-up Soil Quality Assessments: Efficient Infrared-spectroscopic Workflows across Space and Time

pygeoapi. pygeoapi is a Python server implementation of the OGC API suite of standards. The project emerged as part of the next generation OGC API efforts in 2018 and provides the capability for organizations to deploy a RESTful OGC API endpoint using OpenAPI, GeoJSON, and HTML. pygeoapi is open source and released under an MIT license.

swiss_mid-ir-ssl-spectra_v1. Spectra of the Swiss mid-infrared spectral library in version 1.0 (Sustainable Agroecosystems, ETH Zürich)

github-markdown-toc. Easy TOC creation for GitHub README.md

mlr3. mlr3: Machine Learning in R - next generation

geozero. Zero-Copy reading and writing of geospatial data.

misc-scripts. Various command line tools and scripts

PxWeb. Web application for disseminating statistical tables

diving-into-pygeoapi. pygeoapi is an OGC Reference Implementation supporting numerous OGC API specifications. This workshop will cover publishing geospatial data to the Web using pygeoapi in support of the suite of OGC API standards.

qfieldsync. Sync your projects to QField on android

BFS. 🇨🇭Search and Download Data from the Swiss Federal Statistical Office

singularity-fun-stuff. Dockerfile

opusreader. Reading OPUS binary files in R

brukeropusreader. Python package for reading Bruker OPUS files.

SOC-Mapping-Cookbook. Soil Organic Carbon mapping Cookbook

dm. Relational data models