Frédéric Mahé

Hardware-Target-Game-Database. Flash-cart optimized file and folder layouts.

Analogue-Pocket. An issue tracker for Analogue's Pocket, a handheld FPGA device released in December 2021

swarm. A robust and fast clustering method for amplicon-based studies

stampa. Sequence Taxonomic Assignment by Massive Pairwise Alignments

mumu. C++ implementation of lulu, a R package for post-clustering curation of metabarcoding data

pairdist. Creates a neighbor-joining tree from a set of sequences, using maximum likelihood distances based on pairwise sequence alignment

SA1-Pack. SA-1 Pack is a package of patches for activating and using SA-1 in SMW Hacks

nf-metabarcoding. Fred's metabarcoding pipeline with Nextflow

swarm-tests. Datasets and scripts to test the amplicon clustering method swarm

ten_simple_rules_for_code_refactoring. TeX

fred-metabarcoding-pipeline. Fred's metabarcoding pipeline: from raw fastq files to an occurrence table at light-speed

BIO9905MERG1_lulu_seminar. post-clustering curation of metabarcoding data with lulu

vsearch-tests. unit tests for vsearch

metabarcoding-pipeline. A complete description of my current metabarcoding pipeline

FROGS. FROGS is a galaxy/CLI workflow designed to produce an OTUs count matrix from high depth sequencing amplicon data.

Arcade_Offset. This repository will contain character unlocks, trainers, special features, and other improvements to Capcom titles.

retronas. Use a Raspberry Pi as network storage for different retro computers and consoles

wavebird-reversing. Reverse-engineering the WaveBird protocol for the betterment of mankind

Nt-Mini-Noir-Jailbreak. Custom "Jailbreak" firmware for the Analogue Nt Mini V2 "Noir"

bioinformatics-scripts. A collection of useful bioinformatics scripts