Phil Ewels

rich-click. Format click help output nicely with rich.

sra-explorer. Web application to explore the Sequence Read Archive.

rich-codex. Create rich code images for your docs.

AWS-iGenomes. Documentation and description of AWS iGenomes S3 resource.

clusterflow. A pipelining tool to automate and standardise bioinformatics analyses on cluster environments.

CPT-Bootstrap-Carousel. WordPress plugin which generates a custom post type for choosing images and content. Outputs Bootstrap Image Carousel (slider) HTML from a shortcode.

Labrador. A web based tool to manage and automate the processing of publicly available datasets.

nf-core-rnaseq. See the main fork of this repository here >>>

hemnet-commuter. Visualisation, annotation and powerful filtering tools for houses discovered on Hemnet.

tldr-bash. Simplified and community-driven man pages http://tldr-pages.github.io/

niceLiftOver. Wrapper script to take an input file and liftOver the co-ordinates in place, leaving all other data in tact.

ngi_visualizations. Development fork. Head fork here >>>

phil.ewels.co.uk. Website code for phil.ewels.co.uk

sequences. A lightweight and quick DNA sequence manipulation tool.

global-bootstrap-banner. WordPress plugin: Add a global website banner using a Bootstrap alert box.

dotfiles. Personal dotfiles for sharing setups and configs between machines.

nf-core-tools. See the main fork of this repository here >>>

tower-action. See the main repo here:

nf-core-methylseq. See the main fork of this repository here >>>

FastQC-Rust. A fork of FastQC, rewritten in Rust with faithful replication of outputs

bioconda-recipes. Personal fork for bioconda recipe development. See main fork:

HeteroNanoCarb. Conference website for the HeteroNanoCarb event.

nf-core-cookiecutter. DEPRECIATED! Please use nf-core/tools instead

flask-subcommand-issue. Minimal test example for flask / click subcommand problem

nf-core-vscode-extensionpack. See main repo here:

libseqera. Library for Java & Groovy modules shared across Seqera projects

tldr. :books: Simplified and community-driven man pages

miRNA_processing. Scripts to process miRNA from trimming through annotation.

NGI-NextflowDocs. Common documentation for National Genomics Infrastructure pipelines built with Nextflow

nf-aggregate. See https://github.com/seqeralabs/nf-aggregate

nf-core-modules. See the main fork of this repository here >>>

bootstrap-feature-widgets. A simple widget which makes markup for a feature using Twitter Bootstrap styles