R for statistical inference & data visualization for plant molecular biology | lichen27@msu.edu
FriendsDontLetFriends. Friends don't let friends make certain types of data visualization - What are they and why are they bad.
7.1kOnline_R_learning. Online R learning for applied statistics
553SimpleTidy_GeneCoEx. A simple gene co-expression analyses workflow powered by tidyverse and graph analyses
216Quick_data_vis. Introduction to data visualization with R
67customized_upset_plots. Make customized upset plots: from raw data to plots
62ggpathway. A tutorial for pathway visualization using tidyverse, igraph, and ggraph
61ggtraces. A tidyverse and grammar of graphics powered line traces visualizer
31Color_palette_by_cxli. A collection of color palettes inspired by plants and pop culture.
21TidyLocalSynteny. A Tidyverse-based workflow for local synteny visualization
19Catharanthus_scRNA_seq. R scripts for bioRxiv submission
5Catharanthus_multiome. Scripts used in Catharanthus multiome manuscript
4Critically_judge_your_correlations. A function to facilitate critical evaluation of correlations.
3gamete_smRNA_revision. R Markdown files for analyses of rice small RNA, gene expression and DNA methylation
3gamete-small-RNA. R Markdown files for analyses of rice small RNA, gene expression and DNA methylation
1Camptotheca_single_cell. Repository for Camptotheca single cell omics manuscript
1zygote_smRNA. R codes for data visualization
1statements. Successful Job Applications and Grants
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