Ben Marwick

rrtools. rrtools: Tools for Writing Reproducible Research in R

wordcountaddin. Word counts and readability statistics in R markdown documents

ctv-archaeology. CRAN Task View: Archaeological Science

huskydown. An R Markdown template using the bookdown package for preparing a PhD thesis at the University of Washington

AAA2011-Tweets. R code for analyzing tweets relating to #AAA2011 (text mining, topic modelling, network analysis, clustering and sentiment analysis)

JSTORr. Simple text mining of journal articles from JSTOR's Data for Research service

Interactive_PCA_Explorer. Shiny app for exploring a PCA

How-To-Do-Archaeological-Science-Using-R. HTML

researchcompendium. NOTE: This repo is archived. Please see https://github.com/benmarwick/rrtools for my current approach

binford. Datasets used in Binford's 2001 book "Constructing Frames of Reference: An Analytical Method for Archaeological Theory Building Using Ethnographic and Environmental Data Sets"

dayofarchaeology. A Distant Reading of the Day of Archaeology

bookdown-ort. An experiment to add elements of the Open Review Toolkit to bookdown

mjbtramp. TeX

evoarchdata. Datasets from studies of cultural evolution in Archaeology

atom-for-scholarly-writing-with-markdown. TeX

CSSCR-2018-R-Markdown-for-Research-Students. View the slides here: https://rawgit.com/benmarwick/CSSCR-2018-R-Markdown-for-Research-Students/master/uw-csscr-huskydown-slides.html

1989-excavation-report-Madjedbebe. Text, data and code to accompany the analysis of the 1989 excavation data

outliner. R

cvequality. Tests for the equality of coefficients of variation from multiple groups

signatselect. signatselect: Identifying signatures of selection

basic_computational_reproducibility_case_study. TeX

Analysing-Archaeological-Radiocabon-Ages-Using-R. R

UW-eScience-docker-for-reproducible-research. This repository contains my slides and references for a presentation to the UW eScience Institute on using Docker for reproducible research (10 Feb 2015). To view the slides, go to http://benmarwick.github.io/UW-eScience-docker-for-reproducible-research

UW-eScience-reproducibility-social-sciences. This repository contains my slides and references for a presentation to the UW eScience Institute on reproducible research in the social sciences (9 April 2014). To view the slides, go to http://benmarwick.github.io/UW-eScience-reproducibility-social-sciences

SAA2015-Open-Methods. Materials relating to the SAA2015 session on Open Methods in Archaeology

smps. time series colour contour plots of data from Scanning Mobility Particle Sizer (SMPS) data

Stratigraphy-and-radiocarbon-dates-from-Gua-Mo-o-hono-Sulawesi. Text, code and data to accompany Piper et al.

teaching-replication-in-archaeology. This repository contains the data and code for our paper: "How to use replication assignments for teaching integrity in empirical archaeology"

snakecaser. An RStudio Add-in to convert text to snake_case (e.g. for making object names)

CES2021. R

arcas-workshop-good-stat-practice. R

LaplacesDemon. A complete environment for Bayesian inference within R

tidyverse-for-archaeology. View slides at

mjbnaturepaper. R

gsloid. Global Sea Level and Oxygen Isotope Data

roev. Rates of Evolution

rmgarbage. Automatic garbage extraction from OCR'd text

saa-ethics-survey-2020. HTML

saa-meeting-abstracts. Quantitative analysis of test in SAA abstracts (raw data is available in this repo)

web-of-science-archaeology. HTML

bayesinfmatcultphylo. Research compendium for our paper "Bayesian inference of material culture phylogenies using continuous traits from the archaeological record: A birth–death model for Late Neolithic/Early Bronze Age arrowheads from Northwestern Europe"