Sydney, Australia

Ben Fulcher

Expert
@benfulcher

I use methods from physics and statistics to understand the structure and dynamics of complex systems like the brain

hctsa. Highly comparative time-series analysis

837

hctsaTutorial_BonnEEG. hctsa tutorial using the five-class Bonn EEG dataset

32

hctsa_python. Initial attempt to incorporate some time-series analysis features from hctsa into python land

29

TimeSeriesGeneration. Generating time series from a range of dynamical systems

18

GeneCategoryEnrichmentAnalysis. Toolbox for performing gene set enrichment analysis in Matlab (including ensemble enrichment)

17

mouseGradients. Code to reproduce analyses of mouse cortical gradients

10

hctsa_phenotypingFly. MATLAB

7

AllenSDK. Workflow for retrieving spatial gene-expression data from the Allen Institute's Mouse Brain Atlas

6

hctsaDocumentation. gitbook documentation for hctsa

5

CNS2020_hctsaTutorial. CNS 2020 tutorial for hctsa

4

hctsaAnalysisPython. Code for running python analyses of hctsa data

4

hctsa_phenotypingWorm. Running hctsa analysis on movement speed data of five strains of worm

3

GCEA_FalsePositives. Analysis of statistical biases in Gene Set Enrichment Analysis applied to transcriptomic atlas data

3

ResearchResources. Resources for reseachers

2

Empirical1000_LowDimProj. Low-dimensional projection of diverse empirical time-series data

2

mouseStructuralConnectivity. Code for computing interareal axonal connectivity in mouse

2

distributed_hctsa. Running hctsa on a cluster (pbs or slurm)

2

Matlab_mySQL. Tools for connecting to mySQL databases from Matlab

2

hctsa_DREADD. MATLAB

1

FourierAnalysisTutorial. Introduction to Fourier Analysis in Matlab

1
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