Oxford, UK

Benjamin Lee

Expert
@Benjamin-Lee

NIH-OxCam scholar at @ncbi & DPhil student at Oxford. Previously @Harvard CS '20 and @IQTLabs

deep-rules. Ten Quick Tips for Deep Learning in Biology

226

CodonAdaptationIndex. Python Implementation of Codon Adaption Index

37

vdsearch. Viroid-like circRNA discovery and analysis suite

19

DNAvisualization.org. 🧬📈 Turn DNA sequences into interactive visualizations

14

circkit. High-performance circular sequence manipulation

9

squiggle. 📈 DNA Sequence Visualization for Humans

8

viroiddb. A curated database of all available viroid-like RNA sequences

5

cookiecutter-pandoc-paper. A Cookiecutter for writing papers in Markdown via Pandoc

5

riboviria.org. Source code for riboviria.org

2

python-guide. Python best practices guidebook, written for humans.

1

deep-review. A collaboratively written review paper on deep learning, genomics, and precision medicine

1

congo. A simple, lightweight theme for Hugo built with Tailwind CSS.

1

tanstack-start-query. TypeScript

1
13
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