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Postdoc at WUSTL, PhD at UW. How does selection shape info in genomes, networks, collectives? Eco-Evo-Info theory, CS, Neuro, Dynamics, Epi, Feathered dinos.
seirsplus. Models of SEIRS epidemic dynamics with extensions, including network-structured populations, testing, contact tracing, and social distancing.
678neuronalnetworks. Jupyter Notebook
3covid19-schools. Code and data associated with "Model-driven mitigation measures for reopening schools during the COVID-19 pandemic." (2021)
1pycrobe. A simple package for simulations of microbial growth experiments with realistic sources of error.
1ecoevocrm. Computational frameworks for extended consumer-resource models of eco-evoutionary community dynamics.
1covid-testing-vaccinated-population. Supporting data and code for McGee et al. "Proactive testing in a partially vaccinated population." (2021).
1REBAR. Code and data accompanying McGee et al. "Improving the accuracy of bulk fitness assays by correcting barcode processing biases." bioRxiv (2023).
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