Josh Cook

bayesian-data-analysis-course. My notes and work for the Bayesian Data Analysis course taught by Aki Vehtari.

textrank-streamlit. A web app built with Streamlit that summarizes input text

tidy-tuesday. #TidyTuesday to practice data analysis in R

ggasym. Plots three different color schemes on the top-left and bottom-right triangles and the diagonal of a symmetric matrix

PhotoZoomAnimator. An iOS app where I am trying to replicate the interactive animation used in the native Photos app.

the-effect-notes. Notes on learning causal inference from "The Effect" by Nick Huntington-Klein.

WaterMe. An iOS application written in SwiftUI to help log when plants were last watered.

streamlit-sudoku. A Streamlit web application for solving Sudoku.

100DaysOfSwift. 100 days, at least 1 hour a day, of learning the Swift programming language.

spotify-data-analysis. The analysis of my Spotify streaming data.

mustashe. A system for stashing and loading the results of long running computations.

100-days-of-rust. Learning the Rust programming language with 100 continuous days of practice.

tidygraph-oncotree. A tidygraph of the MSK OncoTree

coffee-counter-appwrite-demo. A demonstration of using an Appwrite backend for a Coffee Counting app.

pymc3-stan-comparison. Comparing the performance of the probabilistic programming languages PyMC3 and Stan.

TextRank. A Swift package that implements the 'TextRank' algorithm for text summarization.

statistical-rethinking. Notes on Statistical Rethinking: A Bayesian Course with Examples in R and Stan

bayesian-analysis-with-python_e2. My notes on "Bayesian Analysis with Python" (edition 2) by Osvaldo Martin.

PlantTracker. An iOS app to track one's personal plant collection.

coffee-counter-streamlit. Streamlit web app for visualizing my Coffee Counter data

100DaysOfPython. 100 days, at least 1 hour a day, of learning the Python programming language.

pymc3-tutorials. A collection of Juypter notebooks that serve as my notes on tutorials and examples for PyMC3.

advent-of-code_2021. Advent of Code 2021 (with Python)

academic-kickstart. Personal website made user Academic & Hugo, hosted on Netlify

proof-of-concept-alphafold. A proof-of-concept for using AlphaFold with new amino acid sequences (this may change to a full project in the future).

distill-example. An example website built with Distill and R Markdown

sci-article-summarization. Compare the ability of various summarizing ML/AI methods on scientific articles.

tumoroscope-pymc. Python package of the 'Tumoroscope' model implemented in PyMC.

coffee-counter-api. A simple web API for recording my coffee consumption.

Germinate. A small iOS app to track seed germination.

jhcutils. A bunch of functions that I find myself rewriting in a many scripts.

advent-of-code-2023-rust. My solutions to Advent of Code 2023 (in Rust).

progressive_growing_of_gans. Progressive Growing of GANs for Improved Quality, Stability, and Variation

wagenmaker-data-analysis. Analysis of Registered Replication Report: Strack, Martin, & Stepper (1988) by Wagenmaker et al.

scrapegoodreads. Scraping data from Goodreads

bayesian-statistics-the-fun-way-notes. Notes on the book "Bayesian Statistics the Fun Way" by Will Kurt

TelemetryRecorder. An iPhone and Apple Watch app for collecting watch workout/telemetry data and saving it to iCloud for further data analysis.

visualizing-mcmc. Visualizing MCMC algorithms search of posterior space.

the-rust-programming-language. Code for working through "The Rust Programming Language" (2nd edition).

Colorizer. Use the Colorizer API from DeepAI to color black-and-white photos.

CrownRotationToSpinningWheelDemoApp. A demo app for using my CrownRotationtoSpinningWheel swift package.

openai-expt. Experimenting with the OpenAI model APIs.

NeuroBio-316QC. NeuroBio 316QC: Probabilistic models for neural data: from single neurons to population dynamics

boston311. Python package for interfacing with Boston 311 API.

CoreDataDemo2. A demonstration of using CoreData in an iOS application

HotNetvieweR. Read HotNet2 Results and Convert to Graph Object

doing-bayesian-data-analysis. R

fivethirtyeight-riddler. My solutions to the FiveThirtyEight Riddler puzzles

an-introduction-to-statistical-learning. My notes on the book "An Introduction to Statistical Learning: with Applications in R."

CoreMLDemoApp. A demonstration of using CoreML