Sean Peldom Zhang

papers_for_protein_design_using_DL. List of papers about Proteins Design using Deep Learning

Peplib_Generator. The one model for genesis of peptide ligands

Machine-learning-for-proteins. Listing of papers about machine learning for proteins.

PARP1_inhibitor_optimizer. This is a model find optimized PARP1 inhibitor based on ORGANIC

Essay_For_Molecular_Generation. This repo have a tendency to provide the newest paper about molecular generation or evolution, it will also be convenient for everyone to get info about Drug Discovery).

AiGEM_TeamHeidelberg2017. The AiGEM software suite of Team Heidelberg 2017

My_2021_MCM-ICM_A_solution. this is a solution program of 2021 MCM/ICM problem A

Alchemy. Python

CSU_CHINA_2020_Modeling. This is the iGEM team project model of CSU_CHINA_2020

CSU_CHINA. Wiki repository for 2021 iDEC Team: CSU_CHINA

transformerCPI. TransformerCPI: Improving compound–protein interaction prediction by sequence-based deep learning with self-attention mechanism and label reversal experiments(BIOINFORMATICS 2020) https://doi.org/10.1093/bioinformatics/btaa524

ORGANIC. Objective-Reinforced Generative Adversarial Networks for Inverse-design Chemistry

af_backprop. Python

RFdiffusion. Code for running RFdiffusion

alphafold. Open source code for AlphaFold.

graph-based-deep-learning-literature. links to conference publications in graph-based deep learning