Luca Cappelletti

csv_trimming. Package python to remove common ugliness from a csv-like file

lectures-notes. My latex notes on whatever I'm studying. All are available to the public, but please take them with a grain of salt and notify me in case of errors :)

pygifsicle. Python package wrapping the gifsicle library for editing and optimizing gifs.

dictances. Distances and divergences between distributions implemented in the best way I found in python.

compress_json. The missing Python utility to read and write compressed JSONs.

silence_tensorflow. Python package to shut up Tensorflow warnings and logs.

hyperloglog-rs. A Rust implementation of HyperLogLog trying to be parsimonious with memory.

ugly_csv_generator. Python package to generate ugly real-looking csvs.

dict_hash. Python package to hash dictionaries using default hash, md5, sha256 and more.

plot_keras_history. A simple python package to print a keras NN training history.

bioinformatics_practice. The practice section of the UNIMI Bioinformatics course

extra_keras_metrics. Additional training metrics integrated with the keras NN library.

adigraph. A tex package to draw automatically tex graphs.

barplots. Python package to easily make barplots from multi-indexed dataframes.

sanitize_ml_labels. Python package to standardize the names of ML-related metrics, models and losses.

lectures. A LaTeX documentclass for lecture notes.

ucsc_genomes_downloader. Python package to quickly download genomes from the UCSC.

minhash-rs. A Rust implementation of MinHash trying to be parsimonious with memory.

pubmed_embedding. Building a pubmed graph, automatically.

downloaders. Python package to handle download of multiple types of files.

random_italian_person. Python package to generate an Italian person randomly.

transpose_dict. Python package to transpose dictionaries, just like sparse n-dimensional matrices.

tinycrawler. Web crawler that uses multiprocessing and arbitrarily many proxies to traverse and download websites

map4. The MinHashed Atom Pair fingerprint of radius 2

environments_utils. Utilities to identify which environments is your python script running within.

ringbell. Python package to play a sound when a task completes.

syn-performance. Small crate to measure the time requirements of syn parsing with different usages.

kg-biolink. A knowledge graph for the BioLink metadata standard

memory_time_tracker. Python tool to track the memory and time requirements of software.

biolink_embedding. Pipeline to compute embedding of textual descriptions associated to the Biolink model.

mesh. Python package helping to work with the MESH dataset.

wordnet_knowledge_graph. A Python pipeline converting the NLTK wordnet into a KG, with additional synonym pairs from dictionaries.

covidxpert. Model to distinguish covid cases from viral pneumonia cases.

snv_classifier. Project for the bioinformatics course of professor Valentini, Unimi.

deflate_dict. Python package to deflate and re-inflate dictionaries.

Master-in-Bioinformatics-and-Functional-genomics. Some exercises and example for the neural networks section of the course.

encodeproject. Python package wrapping some of the encode project APIs.

random_csv_generator. Tool for rendering plausible real-life csv data.